Files in Norisama/VFtree
visualization of combined Virulence Factors and Phylogenetic Tree
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/combinedPlot.R
R/data.R
R/ringPlot.R
R/runVFtreeApp.R
R/treePlot.R
README.md
VFtree.Rproj
data/Table100.rda
data/Table150.rda
data/Table25.rda
data/Table6.rda
data/Tree100.rda
data/Tree150.rda
data/Tree25.rda
data/VF100.rda
data/VF150.rda
data/VF25_2.rda
data/VF25_3.rda
data/VF25_4.rda
data/tree_df_25.rda
data/tree_layers_25.rda
data/xy_df_25.rda
inst/.DS_Store
inst/CITATION
inst/extdata/.DS_Store
inst/extdata/image/image1.png
inst/extdata/image/image2.png
inst/extdata/image/overview.png
inst/extdata/image/pitch.png
inst/extdata/image/shiny_example.png
inst/extdata/image/vig_example.png
inst/extdata/sample100.newick
inst/extdata/sample150.newick
inst/extdata/sample25.newick
inst/extdata/table100.csv
inst/extdata/table150.csv
inst/extdata/table25.csv
inst/extdata/table6.csv
inst/extdata/vf100.csv
inst/extdata/vf150.csv
inst/extdata/vf25_2VF.csv
inst/extdata/vf25_3VF.csv
inst/extdata/vf25_4VF.csv
inst/shiny-scripts/app.R
man/Table100.Rd
man/Table150.Rd
man/Table25.Rd
man/Table6.Rd
man/Tree100.Rd
man/Tree150.Rd
man/Tree25.Rd
man/VF100.Rd
man/VF150.Rd
man/VF25_2.Rd
man/VF25_3.Rd
man/VF25_4.Rd
man/circleFun.Rd
man/combinedPlot.Rd
man/getCoordinates.Rd
man/getLayers.Rd
man/getNPoints.Rd
man/getRingData.Rd
man/getRingRadius.Rd
man/nodeGroup.Rd
man/ringPlot.Rd
man/runVFtreeApp.Rd
man/tableInputProcess.Rd
man/treeInputProcess.Rd
man/treePlot.Rd
man/tree_df_25.Rd
man/tree_layers_25.Rd
man/xy_df_25.Rd
tests/testthat.R
tests/testthat/test-combinedPlotting.R
tests/testthat/test-ringPlot.R
tests/testthat/test-treePlot.R
vignettes/.gitignore
vignettes/Introduction_VFtree.Rmd
vignettes/vignettes_images/image1.png
vignettes/vignettes_images/image2.png
