savePlpShareable: Save the plp result as json files and csv files for...

In OHDSI/PatientLevelPrediction: Develop Clinical Prediction Models Using the Common Data Model

Save the plp result as json files and csv files for transparent sharing

Description

Save the plp result as json files and csv files for transparent sharing

Usage

savePlpShareable(result, saveDirectory, minCellCount = 10)

Arguments

result	An object of class runPlp with development or validation results
saveDirectory	The directory the save the results as csv files
minCellCount	Minimum cell count for the covariateSummary and certain evaluation results

Details

Saves the main results json/csv files (these files can be read by the shiny app)

Value

                       The directory path where the results were saved

Examples

 
data("simulationProfile")
plpData <- simulatePlpData(simulationProfile, n = 1000)
saveLoc <- file.path(tempdir(), "savePlpShareable")
results <- runPlp(plpData, saveDirectory = saveLoc)
newSaveLoc <- file.path(tempdir(), "savePlpShareable", "saved")
path <- savePlpShareable(results, newSaveLoc)
# show the saved result
dir(newSaveLoc, full.names = TRUE, recursive = TRUE)

# clean up
unlink(saveLoc, recursive = TRUE)
unlink(newSaveLoc, recursive = TRUE)

OHDSI/PatientLevelPrediction documentation built on Feb. 14, 2025, 9:44 a.m.