extras/createLockfiles.R

In OHDSI/SkeletonPredictionValidationStudy: Add the title of the package here

# code to create lockfiles

##devtools::install_github('ohdsi/OhdsiRTools')

OhdsiRTools::createRenvLockFile(rootPackage = "SkeletonPredictionValidationStudy",
                                includeRootPackage = FALSE,
                                additionalRequiredPackages = c("CohortGenerator", # can't get this?
                                  "survAUC",
                                  "xgboost",
                                  "DBI",
                                  "DT",
                                  "htmltools",
                                  "Hydra",
                                  "plotly",
                                  "pool",
                                  "shiny",
                                  "shinycssloaders",
                                  "shinydashboard",
                                  "shinyWidgets"
                                  ))

args <- c('env', 'export','-n','r-reticulate', '--no-builds',
          '|', 'findstr', '-v', '"prefix"' ,'> pyEnvironment.yml')
system2(reticulate::conda_binary(), args, stdout = TRUE)