aggregate_splice_variants: Aggregate splice variants

In OceaneCsn/DIANE: DIANE

Aggregate splice variants

Description

Merge all splice variants of an expression dataset into unique locus, unaware of alternative splicing, by summing all variants of the same gene

Usage

aggregate_splice_variants(data)

Arguments

data	expression dataframe with splice variants as rownames and samples as columns

Value

dataframe with aggregated rows

Examples

data("abiotic_stresses")
head(aggregate_splice_variants(abiotic_stresses$normalized_counts))

OceaneCsn/DIANE documentation built on Jan. 10, 2024, 6:43 p.m.