gene_annotations: Gene annotations for supported organisms in DIANE

In OceaneCsn/DIANE: DIANE

Gene annotations for supported organisms in DIANE

Description

For each gene identifier, are provided its common name and description.

Usage

gene_annotations

Format

A named list with the following elements:

Arabidopsis thaliana

Dataframe with AGI terms as rownames, and two columns : description and name.

Oryza sativa rapdb

Dataframe with IDs as rownames, and two columns : description and label

Source

For Arabidopsis thaliana

http://bioconductor.org/packages/release/data/annotation/html/org.At.tair.db.html TAIR10 via the bioconductor package org.At.tair.db

Examples

{
 print(head(gene_annotations[["Arabidopsis thaliana"]]))
}

OceaneCsn/DIANE documentation built on Jan. 10, 2024, 6:43 p.m.