QualificationWorkflow | R Documentation |
R6 class for Reporting Engine Qualification Workflow
ospsuite.reportingengine::Workflow
-> QualificationWorkflow
configurationPlan
ConfigurationPlan
object
simulate
SimulationTask
object for time profile simulations
calculatePKParameters
CalculatePKParametersTask
object for PK parameters calculation
plotTimeProfiles
PlotTask
object for time profile plots
plotComparisonTimeProfile
PlotTask
object for comparison of time profiles plots
plotGOFMerged
PlotTask
object for goodness of fit plots
plotPKRatio
PlotTask
object for PK ratio plot
plotDDIRatio
PlotTask
object for DDI ratio plot
ospsuite.reportingengine::Workflow$activateTasks()
ospsuite.reportingengine::Workflow$getActiveTasks()
ospsuite.reportingengine::Workflow$getAllPlotTasks()
ospsuite.reportingengine::Workflow$getAllTasks()
ospsuite.reportingengine::Workflow$getInactiveTasks()
ospsuite.reportingengine::Workflow$getParameterDisplayPaths()
ospsuite.reportingengine::Workflow$getSimulationDescriptor()
ospsuite.reportingengine::Workflow$getWatermark()
ospsuite.reportingengine::Workflow$inactivateTasks()
ospsuite.reportingengine::Workflow$print()
ospsuite.reportingengine::Workflow$printReportingEngineInfo()
ospsuite.reportingengine::Workflow$setParameterDisplayPaths()
ospsuite.reportingengine::Workflow$setSimulationDescriptor()
ospsuite.reportingengine::Workflow$setWatermark()
new()
Create a new QualificationWorkflow
object.
QualificationWorkflow$new(configurationPlan, ...)
configurationPlan
A ConfigurationPlan
object
...
input parameters inherited from R6 class object Workflow
.
A new QualificationWorkflow
object
runWorkflow()
Run qualification workflow tasks for all simulation sets if tasks are activated The order of tasks is as follows:
Run simulations
Perform PK analyses
Perform plot tasks
a. time profiles and residual plots
b. comparison time profiles plots
c. PK ratio tables and plots
d. DDI ratio tables and plots
Render report
QualificationWorkflow$runWorkflow()
All results and plots as a structured output in the workflow folder
updateConfigurationPlan()
Update the content of the workflow configurationPlan
.
Caution, updating the configurationPlan
using this method won't update the workflow simulations and their results.
Use the method only to bypass reloading a full workflow if only plot aesthetics or section content is changed.
QualificationWorkflow$updateConfigurationPlan(configurationPlanFile)
configurationPlanFile
path to the json file corresponding to the Configuration Plan of a Qualification workflow
clone()
The objects of this class are cloneable with this method.
QualificationWorkflow$clone(deep = FALSE)
deep
Whether to make a deep clone.
Other workflows:
MeanModelWorkflow
,
PopulationWorkflow
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