SimulationStructure: SimulationStructure

In Open-Systems-Pharmacology/OSPSuite.ReportingEngine: R package to create reports for the Open Systems Pharmacology models

SimulationStructure

Description

R6 class representing that stores file structure (file names and paths) relating to a particular instance of a simulationSet object

Public fields

workflowFolder

root folder storing workflow results

simulationSet

the set for which the SimulationStructure object stores paths input and results

simulationResultsFolder

path to folder storing results of simulations

pkAnalysisResultsFolder

path to folder storing results of pk analyses

sensitivityAnalysisResultsFolder

path to folder storing results of sensitivity analyses

simulationResultFileNames

vector of names of CSV files storing simulation results

pkAnalysisResultsFileNames

vector of names of CSV files storing results of pk analyses

pkRatioResultsFileNames

vector of names of CSV files storing results of pk ratios

sensitivityAnalysisResultsFileNames

vector of names of CSV files storing results of sensitivity analyses

popSensitivityAnalysisResultsIndexFile

path to file containing index of population sensitivity analysis results

parameterDisplayPaths

data.frame mapping parameters to user-defined display paths

simulationSetDescriptor

Descriptor of simulation sets indicated in reports

Methods

Public methods

• SimulationStructure$new()

• SimulationStructure$clone()

---

Method new()

Create a new SimulationStructure object. Build and store names of potential subfolders to hold simulation results, pkAnalysis results and sensitivityAnalysis results.

Usage

SimulationStructure$new(simulationSet, workflowFolder = getwd())

Arguments

simulationSet

A SimulationSet or PopulationSimulationSet object

workflowFolder

output folder of the workflow

---

Method clone()

The objects of this class are cloneable with this method.

Usage

SimulationStructure$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

Open-Systems-Pharmacology/OSPSuite.ReportingEngine documentation built on April 13, 2025, 10:37 a.m.