PLNmodels-package: PLNmodels: Poisson Lognormal Models
In PLN-team/PLNmodels: Poisson Lognormal Models
PLNmodels-package R Documentation
PLNmodels: Poisson Lognormal Models
Description
The Poisson-lognormal model and variants (Chiquet, Mariadassou and Robin, 2021 \Sexpr[results=rd]{tools:::Rd_expr_doi("10.3389/fevo.2021.588292")}) can be used for a variety of multivariate problems when count data are at play, including principal component analysis for count data, discriminant analysis, model-based clustering and network inference. Implements variational algorithms to fit such models accompanied with a set of functions for visualization and diagnostic.
Author(s)
Maintainer: Julien Chiquet julien.chiquet@inrae.fr (ORCID)
Authors:
Mahendra Mariadassou mahendra.mariadassou@inrae.fr (ORCID)
Stéphane Robin stephane.robin@inrae.fr
François Gindraud francois.gindraud@gmail.com
Other contributors:
Julie Aubert julie.aubert@inrae.fr [contributor]
Bastien Batardière bastien.batardiere@inrae.fr [contributor]
Giovanni Poggiato giov.poggiato@gmail.com [contributor]
Cole Trapnell coletrap@uw.edu [contributor]
Maddy Duran duran@uw.edu [contributor]
See Also
Useful links:
PLN-team/PLNmodels documentation built on Oct. 13, 2024, 4:01 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| PLNmodels-package | R Documentation |
PLNmodels: Poisson Lognormal Models
Description
The Poisson-lognormal model and variants (Chiquet, Mariadassou and Robin, 2021 \Sexpr[results=rd]{tools:::Rd_expr_doi("10.3389/fevo.2021.588292")}) can be used for a variety of multivariate problems when count data are at play, including principal component analysis for count data, discriminant analysis, model-based clustering and network inference. Implements variational algorithms to fit such models accompanied with a set of functions for visualization and diagnostic.
Author(s)
Maintainer: Julien Chiquet julien.chiquet@inrae.fr (ORCID)
Authors:
Mahendra Mariadassou mahendra.mariadassou@inrae.fr (ORCID)
Stéphane Robin stephane.robin@inrae.fr
François Gindraud francois.gindraud@gmail.com
Other contributors:
Julie Aubert julie.aubert@inrae.fr [contributor]
Bastien Batardière bastien.batardiere@inrae.fr [contributor]
Giovanni Poggiato giov.poggiato@gmail.com [contributor]
Cole Trapnell coletrap@uw.edu [contributor]
Maddy Duran duran@uw.edu [contributor]
See Also
Useful links:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.