Files in PMBio/slalom
Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/AllClasses.R
R/RcppExports.R
R/SlalomModel-methods.R
R/mesc-data.R
R/plotting.R
R/slalom-package.R
R/zzz.R
README.md
appveyor.yml
data/mesc.RData
inst/CITATION
inst/NEWS.Rd
inst/extdata/REACTOME_license.txt
inst/extdata/c2.cp.reactome.v4.0.symbols.gmt
inst/extdata/c2.cp.reactome.v5.2.symbols.gmt
inst/extdata/mesc.csv
inst/extdata/outSim/100cells_res_20it.h5py
inst/extdata/outSim/README.txt
inst/extdata/reactome_subset.gmt
inst/extdata/sim_N_20_v3.rds
man/Rcpp_SlalomModel.Rd
man/SlalomModel.Rd
man/addResultsToSingleCellExperiment.Rd
man/initSlalom.Rd
man/mesc.Rd
man/newSlalomModel.Rd
man/plotLoadings.Rd
man/plotRelevance.Rd
man/plotTerms.Rd
man/slalom.Rd
man/topTerms.Rd
man/trainSlalom.Rd
man/updateSlalom.Rd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/slalom-classes.cpp
tests/testthat.R
tests/testthat/test-SlalomModel-methods.R
vignettes/vignette.Rmd
