plotInteractions: Plot interactions
In Pasquali-lab/UMI4Cats: UMI4Cats: Processing, analysis and visualization of UMI-4C chromatin contact data
View source: R/callInteractions.R
plotInteractions R Documentation
Plot interactions
Description
Plot the results of callInteractions.
Usage
plotInteractions(gr_interactions, xlim = NULL, significant = TRUE)
Arguments
gr_interactions
GRangesList outputed by callInteractions.
xlim
Limits for the plot x axis (genomic coordinates).
significant
Logical indicating whether to plot only significant interactions
(default: TRUE).
Value
Produces a ggplot2 plot showing the queried interactions at each
analysed sample.
Pasquali-lab/UMI4Cats documentation built on March 23, 2024, 9:42 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/callInteractions.R
| plotInteractions | R Documentation |
Plot interactions
Description
Plot the results of callInteractions.
Usage
plotInteractions(gr_interactions, xlim = NULL, significant = TRUE)
Arguments
gr_interactions |
GRangesList outputed by |
xlim |
Limits for the plot x axis (genomic coordinates). |
significant |
Logical indicating whether to plot only significant interactions (default: TRUE). |
Value
Produces a ggplot2 plot showing the queried interactions at each analysed sample.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.