Man pages for PavlidisLab/ermineR
Gene set analysis with multifunctionality assessment
| annotation | annotation |
| corr | CORR |
| ermineR | Run ermineJ analysis |
| expression | expression |
| generalStats | generalStats |
| geneSetOpts | geneSetOpts |
| getGoDates | getGoDates |
| getGoGenes | Get genes for a term |
| goAtDate | goAtDate |
| goToday | goToday |
| gsr | GSR |
| GSRstats | GSRstats |
| hitlist | hitlist |
| iterations | iterations |
| listGemmaAnnotations | List gemma annotations |
| makeAnnotation | makeAnnotation |
| ora | ORA |
| precRecall | Precision-recall |
| readErmineJAnnot | Read ermineJ annotation files files |
| readErmineJOutput | Read ermineJ output files |
| reexports | Objects exported from other packages |
| returnOpts | returnOptions |
| roc | ROC |
| scores | scores |
| threshold | threshold |
