transform_and_save_single_cell: Creation of the single cell data file in the CIBERSORTx...
In PelzKo/immunedeconv2: Second generation methods for immune cell deconvolution
transform_and_save_single_cell R Documentation
Creation of the single cell data file in the CIBERSORTx required format
Description
Creation of the single cell data file in the CIBERSORTx required format
Usage
transform_and_save_single_cell(sc_matrix, cell_types, path, verbose = FALSE)
Arguments
sc_matrix
The single cell data as a matrix.
cell_types
A Vector of the cell type annotations. Has to be in the same order as the
samples in single_cell_object.
path
The folder in which the file should be saved.
verbose
Whether to produce an output on the console.
Value
The path to the single cell data file
PelzKo/immunedeconv2 documentation built on Feb. 12, 2025, 4:16 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| transform_and_save_single_cell | R Documentation |
Creation of the single cell data file in the CIBERSORTx required format
Description
Creation of the single cell data file in the CIBERSORTx required format
Usage
transform_and_save_single_cell(sc_matrix, cell_types, path, verbose = FALSE)
Arguments
sc_matrix |
The single cell data as a matrix. |
cell_types |
A Vector of the cell type annotations. Has to be in the same order as the samples in single_cell_object. |
path |
The folder in which the file should be saved. |
verbose |
Whether to produce an output on the console. |
Value
The path to the single cell data file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.