Description Usage Arguments Value Author(s) See Also Examples
given disease-gene associations and go-gene associations, return disease-go associations by using hypergeometric test and fdr mulitiple testing
1 | HypergeometricTest(d2g, go2g, method = "BH", cutoff = 0.05)
|
d2g |
a list of disease-gene associations |
go2g |
a list of GOterm-gene associations |
method |
multiple testing method, the same as parameter in method p.adjust |
cutoff |
multiple testing cut off value |
a list of disease-GO term associations
Peng Ni, Min Li
PSB
, Sun_function
,
get_GOterm2GeneAssos
1 2 3 4 5 | ## see more examples in function PSB or Sun_function
data(d2go_sample)
data(go2g_sample)
data(d2g_fundo_symbol)
HypergeometricTest(d2g_fundo_symbol[names(d2go_sample)],go2g_sample)
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