LLSn2List: convert data.frame of HumanNet log-likelihood Score to list
In PengNi/dSimer: Integration of Disease Similarity Methods
Description
Usage
Arguments
Value
Author(s)
References
See Also
Examples
Description
convert HumanNet normalized log-likelihood score from data.frame to list,
which will be used in FunSim method
Usage
1
LLSn2List(LLSn)
Arguments
LLSn
data.frame of gene-gene normalized log-likelihood score in
HumanNet
Value
a list of normalized log-likelihood score
Author(s)
Peng Ni, Min Li
References
Cheng L, Li J, Ju P, et al. SemFunSim: a new method for measuring
disease similarity by integrating semantic and gene functional association[J].
PloS one, 2014, 9(6): e99415.
See Also
Examples
1
2
3
4
## see examples in function FunSim
data(HumanNet_sample)
llsnlist<-LLSn2List(HumanNet_sample[1:100,])
llsnlist
PengNi/dSimer documentation built on May 8, 2019, 1:28 a.m.
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Description Usage Arguments Value Author(s) References See Also Examples
Description
convert HumanNet normalized log-likelihood score from data.frame to list, which will be used in FunSim method
Usage
1 | LLSn2List(LLSn)
|
Arguments
LLSn |
data.frame of gene-gene normalized log-likelihood score in HumanNet |
Value
a list of normalized log-likelihood score
Author(s)
Peng Ni, Min Li
References
Cheng L, Li J, Ju P, et al. SemFunSim: a new method for measuring disease similarity by integrating semantic and gene functional association[J]. PloS one, 2014, 9(6): e99415.
See Also
Examples
1 2 3 4 | ## see examples in function FunSim
data(HumanNet_sample)
llsnlist<-LLSn2List(HumanNet_sample[1:100,])
llsnlist
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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