API for PengyiYang/PhosR
A set of methods and tools for comprehensive analysis of phosphoproteomics data

Global functions
AUC Source code
AdaEnsemblePred Source code
Pathways.KEGG Man page
Pathways.reactome Man page
PhosphoSite.human Man page
PhosphoSite.mouse Man page
PhosphoSite.rat Man page
RUV Source code
RUVphospho Man page Source code
RUVproteome Man page Source code
SPSs Man page
area Source code
createFrequencyMat Source code
ensemblePred Source code
frequencyScoring Source code
hSEGs Man page
mIntersect Man page Source code
mSEGs Man page
mUnion Man page Source code
matANOVA Man page Source code
meanAbundance Man page Source code
medianScale Source code
medianScaling Man page Source code
multiAdaSampling Source code
pathwayMat Source code
pathwayOverrepresent Man page
pathwayRankBasedEnrichment Man page
phosCollapse Man page Source code
phosphoESC Man page
plotQC Man page Source code
ptImpute Man page Source code
selectGrps Man page Source code
selectOverallPercent Man page Source code
ssImpute Man page Source code
stImp Source code
standardise Man page Source code
tImpute Man page Source code
PengyiYang/PhosR documentation built on Dec. 3, 2019, 4:44 a.m.