acq2txt: Calls the acq2txt command (python bioread package) to convert...

In PennStateDEPENdLab/experiment_pipeline: Generates data markdown for NeuroMap Task

Calls the acq2txt command (python bioread package) to convert an acq file to txt

Description

This is an R wrapper around the acq2txt python command. It also supports output directory specification and gzip'ing files

Usage

acq2txt(
  acq_files,
  acq2txt_opts = "--missing-as=.",
  txt_output_dir = NULL,
  gzip_txt = TRUE,
  acq2txt_location = NULL
)

Arguments

acq_files	Character vector of acq files to convert to txt.
acq2txt_opts	Command line options passed to acq2txt. Default: "–missing-as=."
txt_output_dir	Directory for converted txt files. Will be created if it does not exist.
gzip_txt	A logical (TRUE/FALSE) indicating whether to gzip txt files after conversion. Default: TRUE
acq2txt_location	The full path to the acq2txt command. If not provided, this function will use the which/where command to look in the system path.

Details

Note: the acq2hdf5 function is far faster than acq2txt and also produces a much smaller file! In general, I would recommend that command for handling Acqknowledge files

PennStateDEPENdLab/experiment_pipeline documentation built on Nov. 27, 2024, 4:56 a.m.