PeteHaitch/methsim: An R package to simulate DNA methylation data
methsim is software to simulate DNA methylation sequencing data. methsim can currently simulate data from bisulfite-sequencing assays such as methylC-seq or BS-seq. It uses a non-stationary, inhomogeneous Markov model. This model can incorporate the strong spatial dependence of DNA methylation. Simulation parameters can be estimated from data or specified by the user.
Getting started
Browse package contents
Package details |
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| Author | Peter Hickey <peter.hickey@gmail.com> |
| Bioconductor views | DNAMethylation MethylSeq Software |
| Maintainer | Peter Hickey <peter.hickey@gmail.com> |
| License | GPL (>= 2) |
| Version | 0.5.0.9013 |
| URL | www.github.com/PeteHaitch/methsim |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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