methsim is software to simulate DNA methylation sequencing data. methsim can currently simulate data from bisulfite-sequencing assays such as methylC-seq or BS-seq. It uses a non-stationary, inhomogeneous Markov model. This model can incorporate the strong spatial dependence of DNA methylation. Simulation parameters can be estimated from data or specified by the user.
|Author||Peter Hickey <[email protected]>|
|Bioconductor views||DNAMethylation MethylSeq Software|
|Maintainer||Peter Hickey <[email protected]>|
|License||GPL (>= 2)|
|Package repository||View on GitHub|
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