methsim: Simulate DNA methylation data.
In PeteHaitch/methsim: An R package to simulate DNA methylation data
Description
methsim is software to simulate DNA methylation sequencing data.
methsim can currently simulate data from bisulfite-sequencing assays,
such as methylC-seq or BS-seq. It uses a non-stationary, inhomogeneous Markov
model. This model can incorporate the strong spatial dependence of DNA
methylation. Simulation parameters can be estimated from data or specified
by the user.
Details
Please refer to the vignettes to see how to use the methsim package.
PeteHaitch/methsim documentation built on May 8, 2019, 1:32 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
methsim is software to simulate DNA methylation sequencing data.
methsim can currently simulate data from bisulfite-sequencing assays,
such as methylC-seq or BS-seq. It uses a non-stationary, inhomogeneous Markov
model. This model can incorporate the strong spatial dependence of DNA
methylation. Simulation parameters can be estimated from data or specified
by the user.
Details
Please refer to the vignettes to see how to use the methsim package.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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