Files in PeteHaitch/methsim
An R package to simulate DNA methylation data
.Rbuildignore
.coveralls.R
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/AllGenerics.R
R/AllUtilities.R
R/MethylSeekRGR-class.R
R/MethylSeekRGR-utilities.R
R/MethylomeParam-class.R
R/PartitionedMethylome-class.R
R/RcppExports.R
R/SimulatedBS-class.R
R/SimulatedMethylome-class.R
R/WGBSParam-class.R
R/addDMRs.R
R/findMostOverlapping.R
R/funByPM.R
R/methsim.R
R/partitionMethylome.R
R/sampling-utilities.R
R/zzz.R
README.md
TODOs.Rmd
data-raw/prepare.R
data/ADS.RData
data/ADS_adipose.RData
data/ADS_iPSC.RData
man/ADS.Rd
man/ADS_adipose.Rd
man/ADS_iPSC.Rd
man/MethylSeekRGR-class.Rd
man/MethylomeParam-class.Rd
man/PartitionedMethylome-class.Rd
man/SimulatedBS-class.Rd
man/SimulatedMethylome-class.Rd
man/WGBSParam-class.Rd
man/findMostOverlapping.Rd
man/funByPM.Rd
man/methsim.Rd
man/partitionMethylome.Rd
man/simulate-MethylomeParam-method.Rd
man/simulate-WGBSParam-method.Rd
man/simulate.Rd
methsim.Rproj
notes.Rmd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/computeP.cpp
src/simErrorInPlace.cpp
src/simulateZ.cpp
src/tabulatez.cpp
tests/testthat.R
tests/testthat/test-fake.R
tests/testthat/test-findMostOverlapping.R
