Man pages for PeteHaitch/methsim
An R package to simulate DNA methylation data
| ADS | 'SimulateMethylomeParam' object for the _ADS_ sample. |
| ADS_adipose | 'SimulateMethylomeParam' object for the _ADS-adipose_ sample. |
| ADS_iPSC | 'SimulateMethylomeParam' object for the _ADS-iPSC_ sample. |
| findMostOverlapping | Find most overlapping element in subject for each element of... |
| funByPM | Apply a function to a 'MethylationTuples::MethPat' object,... |
| methsim | Simulate DNA methylation data. |
| MethylomeParam-class | MethylomeParam class |
| MethylSeekRGR-class | MethylSeekRGR class |
| PartitionedMethylome-class | PartitionedMethylome class. |
| partitionMethylome | Partition a methylome into UMRs, LMRs, PMRs and others. |
| simulate | Simulate responses |
| SimulatedBS-class | SimulatedBS class. |
| SimulatedMethylome-class | SimulatedMethylome class. |
| simulate-MethylomeParam-method | Simulate a methylome. |
| simulate-WGBSParam-method | Simulate a bisulfite-sequencing experiment. |
| WGBSParam-class | WGBSParam class |
