API for Pinlyu3/LRLoop
Two-way communication between cells
| Global functions | |
|---|---|
| CircosPlot | Man page Source code |
| CircosPlot2 | Man page Source code |
| Circos_plot | Man page |
| Circos_plot_2 | Man page |
| L1R1L2R2Score | Man page Source code |
| L1R1L2R2ScoreHill | Man page Source code |
| LRL_info_collection | Man page Source code |
| LRL_stats | Man page Source code |
| LRscore | Man page Source code |
| MostBasicLRinfo | Man page Source code |
| PrepareBasics | Man page Source code |
| apply_hub_corrections_noligand | Man page Source code |
| construct_receptor_target_matrix | Man page Source code |
| construct_receptor_tf_matrix | Man page Source code |
| construct_tf_target_matrix_noligand | Man page Source code |
| getLRLoopPartnerInfo | Man page Source code |
| getLRscoreupdated_cutoff | Man page Source code |
| get_DEG | Man page Source code |
| get_LRL | Man page Source code |
| get_LRscores | Man page Source code |
| get_expr_lr | Man page Source code |
| get_pct_expr | Man page Source code |
| getnLRloops_rand | Man page Source code |
| make_LRL_list | Man page Source code |
| make_discrete_ligand_target_matrix_general | Man page Source code |
| plotLRL | Man page Source code |
| print_LRL_Score_options | Man page Source code |
| takeNicheNetScores | Man page Source code |
| take_LR_expr_score | Man page Source code |
| updateLRscores | Man page Source code |
| updateLRscores_rand | Man page Source code |
| writeLRL | Man page Source code |
