construct_tf_target_matrix_noligand: Convert gene regulatory network into a matrix.
In Pinlyu3/LRLoop: Two-way communication between cells
Description
Usage
Arguments
Value
View source: R/construct_tf_target_matrix_noligand.R
Description
Convert gene regulatory network into a matrix.
Usage
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construct_tf_target_matrix_noligand(
weighted_networks,
tfs_as_cols = FALSE,
standalone_output = FALSE
)
Arguments
weighted_networks
the Seurat object of interest
tfs_as_cols
vectors of idents
standalone_output
vectors of idents
Value
A matrix of tf-target regulatory weights
Pinlyu3/LRLoop documentation built on Jan. 7, 2022, 3:04 p.m.
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Description Usage Arguments Value
View source: R/construct_tf_target_matrix_noligand.R
Description
Convert gene regulatory network into a matrix.
Usage
1 2 3 4 5 | construct_tf_target_matrix_noligand(
weighted_networks,
tfs_as_cols = FALSE,
standalone_output = FALSE
)
|
Arguments
weighted_networks |
the Seurat object of interest |
tfs_as_cols |
vectors of idents |
standalone_output |
vectors of idents |
Value
A matrix of tf-target regulatory weights
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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