makePixelTable: Make 'pixelTable' from biomass, age, land-cover and species...

In PredictiveEcology/LandR: Landscape Ecosystem Modelling in R

Make pixelTable from biomass, age, land-cover and species cover data

Description

Make pixelTable from biomass, age, land-cover and species cover data

Usage

makePixelTable(
  speciesLayers,
  standAgeMap,
  ecoregionFiles,
  biomassMap,
  rasterToMatch,
  rstLCC,
  printSummary = TRUE,
  doAssertion = getOption("LandR.assertions", TRUE)
)

Arguments

speciesLayers	A RasterStack or RasterLayer that should contain species cover data in the study area
standAgeMap	A rasterLayer of stand ages with attribute "imputedPixID"
ecoregionFiles	A list with two objects: the ecoregionMap and a table summarizing its information per pixelID. See ecoregionProducer.
biomassMap	raster of total stand biomass in t/ha. Biomass units are converted to g/m^2.
rasterToMatch	A RasterLayer objects to use as the template for all subsequent raster operations (i.e., the one used throughout the simulation).
rstLCC	raster of land-cover class, e.g., LCC2005
printSummary	Logical. If TRUE, the default, a print out of the summary(pixelTable) will occur.
doAssertion	A logical indicating whether some internal tests should be run to ensure the function is running correctly. Default: getOption("LandR.assertions", TRUE).

Value

A data.table as many rows as non-NA pixels in rasterToMath and the columns containing pixel data from the input raster layers, with biomass in g/m^2.

PredictiveEcology/LandR documentation built on June 7, 2024, 4:16 p.m.