show.MotifMatcher: Show a MotifMatcher object
In PriceLab/trena: Fit transcriptional regulatory networks using gene expression, priors, machine learning
show,MotifMatcher-method R Documentation
Show a MotifMatcher object
Description
Show a MotifMatcher object
Usage
## S4 method for signature 'MotifMatcher'
show(object)
Arguments
object
An object of the class MotifMatcher
Value
A truncated view of the supplied object
Examples
load(system.file(package="trena", "extdata/ampAD.154genes.mef2cTFs.278samples.RData"))
target.gene <- "MEF2C"
tfs <- setdiff(rownames(mtx.sub), target.gene)
lassopv.solver <- LassoPVSolver(mtx.sub, target.gene, tfs)
show(lassopv.solver)
PriceLab/trena documentation built on March 16, 2023, 10:01 a.m.
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| show,MotifMatcher-method | R Documentation |
Show a MotifMatcher object
Description
Show a MotifMatcher object
Usage
## S4 method for signature 'MotifMatcher' show(object)
Arguments
object |
An object of the class MotifMatcher |
Value
A truncated view of the supplied object
Examples
load(system.file(package="trena", "extdata/ampAD.154genes.mef2cTFs.278samples.RData")) target.gene <- "MEF2C" tfs <- setdiff(rownames(mtx.sub), target.gene) lassopv.solver <- LassoPVSolver(mtx.sub, target.gene, tfs) show(lassopv.solver)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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