PTSZ95: PTSZ95
In Queen0044/scHiCBayes: Single cell HiC data imputation using Bayesian hierarchy model.
Description
Usage
Arguments
Value
Examples
Description
This function calculates PTDO when fix PTSZ=0.95.
Usage
1
PTSZ95(observed, expected, result)
Arguments
observed
Observed single cells matrix with each column being the upper triangular of a single cell.
expected
Underline true counts from simulation.
result
Result form MCMCImpute function.
Value
A vector of PTDO and its SD when fixing PTSZ to be 0.95, and the threshold used in that case.
Examples
1
PTSZ95(observed=K562_T1_7k, expected=K562_1_true, result=T1_7k_res)
Queen0044/scHiCBayes documentation built on Dec. 18, 2021, 8:43 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
This function calculates PTDO when fix PTSZ=0.95.
Usage
1 | PTSZ95(observed, expected, result)
|
Arguments
observed |
Observed single cells matrix with each column being the upper triangular of a single cell. |
expected |
Underline true counts from simulation. |
result |
Result form MCMCImpute function. |
Value
A vector of PTDO and its SD when fixing PTSZ to be 0.95, and the threshold used in that case.
Examples
1 | PTSZ95(observed=K562_T1_7k, expected=K562_1_true, result=T1_7k_res)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.