performance: performance
In Queen0044/scHiCBayes: Single cell HiC data imputation using Bayesian hierarchy model.
Description
Usage
Arguments
Value
Examples
Description
This function summarizes the accuracy of simulated data.
Usage
1
performance(observed, expected, imputed)
Arguments
observed
Observed observed cells matrix, with each column being the upper triangular of a observed cell.
expected
Underline true count of the simulated data.
imputed
Imputed matrix from MCMCImpute.
Value
A list of accuracy measurements with mean and standard error.
Examples
1
2
3
data("K562_1_true")
options(digits = 2)
performance(observed=K562_T1_7k, expected=K562_1_true, imputed=T1_7k_imp)
Queen0044/scHiCBayes documentation built on Dec. 18, 2021, 8:43 a.m.
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Description Usage Arguments Value Examples
Description
This function summarizes the accuracy of simulated data.
Usage
1 | performance(observed, expected, imputed)
|
Arguments
observed |
Observed observed cells matrix, with each column being the upper triangular of a observed cell. |
expected |
Underline true count of the simulated data. |
imputed |
Imputed matrix from MCMCImpute. |
Value
A list of accuracy measurements with mean and standard error.
Examples
1 2 3 | data("K562_1_true")
options(digits = 2)
performance(observed=K562_T1_7k, expected=K562_1_true, imputed=T1_7k_imp)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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