neivar: Calculate neighborhood standard deviation.

In Queen0044/scHiCBayes: Single cell HiC data imputation using Bayesian hierarchy model.

Description

This function calculates the standard deviation of nonzero observations among single cells.

Usage

neivar(single, nei, n)

Arguments

single	matrix with each column being the upper triangular of each single cell
nei	neighborhood size
n	matrix size

Value

standard deviation matrix with each position being the standard deviation in the neighborhood among all single cells.

Examples

neivar(m,nei=2) 

Queen0044/scHiCBayes documentation built on Dec. 18, 2021, 8:43 a.m.