gt_get_nodes: get nodes from gatingTemplate object

In RGLab/openCyto: Hierarchical Gating Pipeline for flow cytometry data

get nodes from gatingTemplate object

Description

get nodes from gatingTemplate object

Usage

gt_get_nodes(
  x,
  y,
  order = c("default", "bfs", "dfs", "tsort"),
  only.names = FALSE
)

Arguments

x	gatingTemplate
y	character node index. When missing, return all the nodes
order	character specifying the order of nodes. options are "default", "bfs", "dfs", "tsort"
only.names	logical specifiying whether user wants to get the entire gtPopulation object or just the name of the population node

Examples

## Not run: 
gt <- gatingTemplate(system.file("extdata/gating_template/tcell.csv",package = "openCyto"))
gt_get_nodes(gt)[1:2]
gt_get_nodes(gt, only.names = TRUE)
gt_get_nodes(gt, "/nonDebris")

## End(Not run)

RGLab/openCyto documentation built on Aug. 23, 2023, 6:53 a.m.