align.global: Global Alignment of two Protein Interaction Network
In RicUIB/AligNet: Tool to Analyze PPI Networks and Align Networks using AligNet Algorithm algorithm
Description
Usage
Arguments
Value
Description
Return a global alignment, from the list of local alignments and the table
of scores. The function first calculate a list of alignments with
selectAligns, then found a solution of the hypergraph mathching
problem. And finally extend this alignment to a global alignment
Usage
1
align.global(localAligns, Sim, AllSteps = FALSE)
Arguments
localAligns
a list of local alignments
Sim
a similarity matrix
AllSteps
a boolean to determine whether return all intermediate
global alignments
Value
Global a global alignment and, if AllSteps is TRUE all intermediate alignments
RicUIB/AligNet documentation built on May 28, 2019, 2:27 p.m.
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Description Usage Arguments Value
Description
Return a global alignment, from the list of local alignments and the table
of scores. The function first calculate a list of alignments with
selectAligns, then found a solution of the hypergraph mathching
problem. And finally extend this alignment to a global alignment
Usage
1 | align.global(localAligns, Sim, AllSteps = FALSE)
|
Arguments
localAligns |
a list of local alignments |
Sim |
a similarity matrix |
AllSteps |
a boolean to determine whether return all intermediate global alignments |
Value
Global a global alignment and, if AllSteps is TRUE all intermediate alignments
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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