XIC_QFNNTDIVLLEDFQK_3_DIAlignR: Extracted-ion chromatograms (XICs) of a peptide

Description Usage Format Source

Description

XICs of peptide QFNNTDIVLLEDFQK/3 (precursor ID: 4618) from three SWATH runs:

run0 : hroest_K120808_Strep10%PlasmaBiolRepl1_R03_SW_filt.chrom.mzML
run1 : hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt.chrom.mzML
run2 : hroest_K120809_Strep10%PlasmaBiolRepl2_R04_SW_filt.chrom.mzML

Usage

1

Format

A list of three elements where each element consists of a list of six data frames. Each data frame has two columns:

time

Retention time of ananlyte in the run, in sec

intensity

Intensity of signal for the transition

Source

Raw files are downloaded from Peptide Atlas. File test_GenerateData.R has source code to generate the example data.


Roestlab/DIAlign documentation built on Feb. 25, 2021, 5:18 p.m.