combine_repeats: Function to combine repeated measures
In Rundmus/BAf-R_package: Binder Array data hanlding package in facility

Description Usage Arguments Value Author(s) See Also

Merge repeated measures by taking one representative value (e.g. average) of them. It assumes the measurements were conducted in separate binder batches (or assays), so that the data are stored in different columns of baf. If repeated measurements were conducted in a same binder batch, transform the data using transform_to_landscape_for_repeats.

combine_repeats(
  baf,
  rep_binder,
  rm_grp_rep_binder = T,
  center = T,
  scale = F,
  FUN = function(x) mean(x, na.rm = T),
  ...
)

`baf`	an object of the `BAf-class`
`rep_binder`	a `factor` (or a `vector`) that indicates which binders were repeated, so their values should be combined.
`rm_grp_rep_binder`	if the `'grp'` and `'rep_binder'` columns in `@binder` that were added by `transform_to_landscape_for_repeats`, they should be removed.
`center, scale`	if the difference between assays should be adjusted using `scale`
`FUN`	the function to compute a reference value such as mean and median
`...`	not used