sub-BAf-ANY-ANY-ANY-method: Extract a part of data
In Rundmus/BAf-R_package: Binder Array data hanlding package in facility

Description Usage Arguments Value Author(s) See Also Examples

This function works in almost same way as the generic form of it.
Note: When j is missing, this takes rows instead of columns.

1 2	## S4 method for signature 'BAf,ANY,ANY,ANY' x[i, j, ..., droplevel = TRUE, drop]

`x`	an object of the `BAf-class`
`i`	row
`j`	column
`..., drop`	currently not used
`droplevel`	whether unused factor levels after extraction should be dropped out in `@sinfo` and `@binder`

an object of the BAf-class that contains a part

Mun-Gwan Hong <mun-gwan.hong@scilifelab.se>

Extract

data(sba)
# the samples in 1:4 rows and the values of 3rd target
sba2 <- sba[1:4, 3]
summary(sba2)

# the data of "T2" and "T3"
sba3 <- sba[, c("T2", "T3")]
summary(sba3)

# the data of the samples on plate 2
sba4 <- sba[sba@sinfo$plate == "2", ]
summary(sba4)

# the data of cancer patients only
sba5 <- sba[!is.na(sba@sinfo$dis) & sba@sinfo$dis == "cancer", ]
summary(sba5)