ct.RRAalpha | R Documentation |

This function is called internally as a single instance of the beta aggregation step in RRAa. Users should not interact with it directly.
The expected input is a set of rank statistics, and a paired `alpha`

argument defining which values to consider in downstream analyses (see below).

As of gCrisprTools 2.0, this function does not consider 'row.names' associated with the provided values, and the p-values are expected to be provided in register with the provided 'g.key' object.

ct.RRAalpha(p, g.key, shuffle = FALSE)

`p` |
A single column matrix of rank statistics. |

`g.key` |
data.frame with guide and gene names |

`shuffle` |
Logical indicating whether to shuffle the rank statistics prior to calculating the rho statistics (useful for permutation). |

Nothing, or a named list of target-level P-values, which are treated as a rho statistic in the permutation step.

Russell Bainer

data('fit') data('ann') geneScores <- ct.RRAalpha(fit$p.value, ann, shuffle = FALSE)

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