plot_idxinc_totals: Plot total incident diagnosed infectious infections

In SC-COSMO/sccosmomcma: Stanford-CIDE COronavirus Simulation MOdel (SC-COSMO) for Mexico City Metropolitan Area Analysis

Description

plot_idxinc_totals plot total number of incident diagnosed infectious infections by age group and/or in total over time.

Usage

plot_idxinc_totals(
  l_out_cosmo,
  proportion = FALSE,
  age_proportion = FALSE,
  only_all = TRUE,
  print_plot = TRUE
)

Arguments

l_out_cosmo	List with output from SC-COSMO and all parameters.
proportion	Flag (default is FALSE) of whether to divide total number of incident diagnosed infectious by total population.
age_proportion	Flag (default is FALSE) of whether to divide total number of incident diagnosed infectious by age-specific total population.
only_all	Flag (default is TRUE) of whether only overall ("All") total total number of incident diagnosed infectious should be plotted.
print_plot	Flag (default is TRUE) of whether the plot should be printed in screen.

Value

A ggplot object.

SC-COSMO/sccosmomcma documentation built on Dec. 18, 2021, 11:56 a.m.