biolum_events: Identify potential bioluminescence emission events

Description Usage Arguments Details Examples

Description

Identify potential bioluminescence emission events

Usage

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biolum_events(x, sensitivity = 1.26, max_light = exp(-20))

Arguments

x

a data.frame such as returned by BioPIC output

sensitivity

A threshold to decide if a signal peak is high enought. See details.

max_light

Max light level (W/cm^2) where a event can be detected. Set to NULL to disable.

Details

Sensor sensitivity threshold: The minimum ratio between two measures to be considered significantly different. In laboratory experiments, the sensors measured light intensity +- 2 units while submitted to a constant light intensity. Translating the sensor log-scale units to SI linear scale units this accuracy measure translates into a minimum ratio of 1.26

Examples

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## Not run: 
data(exses)
exses$tdr$light_si <- SI_light(exses$tdr$light)
biolum_tbl <- tdrply(BioPIC, obj = exses)
ble_tbl <- Reduce(rbind, lapply(biolum_tbl, biolum_events))

## End(Not run)

SESman/rbl documentation built on May 9, 2019, 11:10 a.m.