locationSummary: Summaries of Location Samples

In SWotherspoon/SGAT: Solar/Satellite Geolocation for Animal Tracking

Summaries of Location Samples

Description

Summarize a set of location samples

Usage

locationSummary(
  s,
  time = NULL,
  discard = 0,
  alpha = 0.95,
  collapse = TRUE,
  chains = NULL
)

locationMean(s, discard = 0, collapse = TRUE, chains = NULL)

Arguments

s	a single chain or a list of parallel chains generated by estelleMetropolis or stellaMetropolis.
time	the times corresponding to the x locations.
discard	number of initial samples to discard.
alpha	coverage of the credible intervals calculated by locationSummary.
collapse	whether to collapse parallel chains to a single chain
chains	the set of chains to retain, or NULL.

Details

These functions compute various summaries of a sample or list of samples generated by estelleMetropolis or stellaMetropolis.

These functions accept either a sample from a single mcmc run, or a list of samples from parallel mcmc runs. When collapse is true, multiple samples are merged and single result is returned, otherwise a result is returned for each sample.

Value

locationSummary	returns a dataframe or a list of dataframes of summary quantities for each location.
locationMean	returns an array or a list of arrays of the means of the samples for each location.

SWotherspoon/SGAT documentation built on June 1, 2022, 10:49 p.m.