biomart_obj: Get available Ensembl dataset
In Sage-Bionetworks/sageseqr: Identify differentially expressed genes counts data
biomart_obj R Documentation
Get available Ensembl dataset
Description
Helper function to search relative Ensembl datasets by partial organism names.
Usage
biomart_obj(organism, host)
Arguments
organism
A character vector of the organism name. This argument takes partial strings. For example,"hsa" will match "hsapiens_gene_ensembl".
host
An optional character vector specifying the release version. This specification is highly recommended for a reproducible workflow. (see "biomaRt::listEnsemblArchives()")
Sage-Bionetworks/sageseqr documentation built on June 13, 2024, 2:11 p.m.
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| biomart_obj | R Documentation |
Get available Ensembl dataset
Description
Helper function to search relative Ensembl datasets by partial organism names.
Usage
biomart_obj(organism, host)
Arguments
organism |
A character vector of the organism name. This argument takes partial strings. For example,"hsa" will match "hsapiens_gene_ensembl". |
host |
An optional character vector specifying the release version. This specification is highly recommended for a reproducible workflow. (see |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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