dropped_genes: Dropped Genes Finder
In Sage-Bionetworks/sageseqr: Identify differentially expressed genes counts data
dropped_genes R Documentation
Dropped Genes Finder
Description
Finds gene IDs in the filtered counts which were removed in cqn normalization
most likely as a function if no GC or length estimates being present in the
user specified biomart object.
Usage
dropped_genes(filtered_counts, cqn_counts)
Arguments
filtered_counts
The target containing counts after low gene
expression has been removed. Defaults to target name constrained by
"targets::tar_make()".
cqn_counts
A counts data frame normalized by CQN.
Sage-Bionetworks/sageseqr documentation built on June 13, 2024, 2:11 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| dropped_genes | R Documentation |
Dropped Genes Finder
Description
Finds gene IDs in the filtered counts which were removed in cqn normalization most likely as a function if no GC or length estimates being present in the user specified biomart object.
Usage
dropped_genes(filtered_counts, cqn_counts)
Arguments
filtered_counts |
The target containing counts after low gene
expression has been removed. Defaults to target name constrained by
|
cqn_counts |
A counts data frame normalized by CQN. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.