get_wilcox_test: get_wilcox_test

In ScialdoneLab/MitoHEAR: Quantification of Mitochondrial DNA Heteroplasmy

get_wilcox_test

Description

get_wilcox_test

Usage

get_wilcox_test(heteroplasmy_matrix, cluster, label_1, label_2, index = NULL)

Arguments

heteroplasmy_matrix	Third element returned by get_heteroplasmy.
cluster	Vector specifying a partition of the samples.
label_1	Character name of a first label included in cluster. It denotes the first group used for the Wilcoxon test
label_2	Character name of a second label included in cluster and different from label_1. it denotes the second group used for the Wilcoxon test.
index	Fifth element returned by get_heteroplasmy.

Value

It returns a vector of length equal to n_row in matrix. Each element stands for a base and it contains the adjusted p-value (FDR), obtained in unpaired two-samples Wilcoxon test from the comparison of the heteroplasmy between the label_1 and label_2 group.

Author(s)

Gabriele Lubatti [e-mail]

See Also

https://www.rdocumentation.org/packages/stats/versions/3.6.2/topics/wilcox.test

ScialdoneLab/MitoHEAR documentation built on June 11, 2022, 7:18 a.m.