plot_heteroplasmy_variability: plot_heteroplasmy_variability

In ScialdoneLab/MitoHEAR: Quantification of Mitochondrial DNA Heteroplasmy

plot_heteroplasmy_variability

Description

plot_heteroplasmy_variability

Usage

plot_heteroplasmy_variability(
  heteroplasmy_matrix,
  cluster,
  threshold = 0.1,
  frac = FALSE,
  index
)

Arguments

heteroplasmy_matrix	Third element returned by get_heteroplasmy.
cluster	Vector specifying a partition of the samples.
threshold	Numeric value.
frac	Logical. If FALSE the absolute number of cells that have at least one base with heteroplasmy above threshold are shown separated by cluster. If TRUE, then the fraction of cells are shown.
index	Fifth element returned by get_heteroplasmy.

Value

ggplot2 object

Author(s)

Gabriele Lubatti [e-mail]

ScialdoneLab/MitoHEAR documentation built on June 11, 2022, 7:18 a.m.