plot_base_coverage: plot_base_coverage

In ScialdoneLab/MitoHEAR: Quantification of Mitochondrial DNA Heteroplasmy

plot_base_coverage

Description

plot_base_coverage

Usage

plot_base_coverage(
  sum_matrix,
  sum_matrix_qc,
  selected_cells,
  interactive = FALSE,
  text_size = 10
)

Arguments

sum_matrix	First element returned by the function get_heteroplasmy.
sum_matrix_qc	Second element returned by the function get_heteroplasmy.
selected_cells	Character vector with cells used fro plotting the coverage.
interactive	Logical. If TRUE an interactive plot is produced.
text_size	Character specifying the size of the text for ggplot2.

Value

ggplot2 object (if interactive=FALSE) or plotly object (if (if interactive=TRUE)

Author(s)

Gabriele Lubatti [e-mail]

See Also

https://plotly.com/r/

ScialdoneLab/MitoHEAR documentation built on June 11, 2022, 7:18 a.m.