addChemsToHTTK | Function that adds chemical to httk package chem list. |
addDataSet | Server side function for the UI used to add external... |
addDataSetUI | UI for adding external observation datasets to projects |
addParameters | Add user selected parameters to the PBPK reporting document.... |
addPBPKequations | Add PBPK equations to the PBPK reporting document. Should not... |
calc_cyp2b6 | Calculate cyp2b6 fraction |
calcMPCPPGL | Calcuate MPPGL and CPPGL based on age |
calculatePartitionCoefficients | Calculate Partition Coefficient |
clearProjectDb | Clear Project Db |
createEmptyUserDb | Creates a new userDb based on the empty database in the... |
createHESIgraphs | Pipe to add concentration-timecourse data to the report... |
createPBPKflowchart | Creates the PBPK model flowchart. Should not be used by... |
externDbSelect | Runs all select queries an arbitrary database |
getAllCypData | get data for human cyp fraction by age |
getAllParamValuesForModel | Gets all the parameter values for the model. This function... |
getAllSetChoices | get all set names for a given paramter set |
getAllVariabilityValuesForModel | Gets all the variability values for the model. This data... |
getDbConn | Gets the connection to the Db to run all the queries against |
getFileFolderPath | Show dialogs to select files or folders |
getLifecourseBodyHeight | Get average body height using the life course equation |
getLifecourseBodyHeightMale | Calculate body height of average human male using the... |
getLifecourseBodyWeight | Get average body weight using the life course equation |
getLifecourseBodyWeightFemale | Calculate body weight in kg of average human female using the... |
getLifecourseBodyWeightMale | Calculate body weight in kg of average human male using the... |
getLifecourseCardiacOutput | Get the cardiac output based on the life course equations |
getLifecourseGlomerularFiltrationRate | Get the Glomerular Filteration Rate for a given age and... |
getLifecourseLungDeadSpace | Get the Lung Dead Space for a given age and gender |
getLifecourseTidalVolume | Get the tidal volume for a given age and gender |
getLifecourseTissuePerfusion | Get perfusion for tissues provided on the basis of age and... |
getLifecourseTissueVolumes | Get volumes for tissues provided on the basis of age and... |
getLifecourseUrineProductionRate | Get the urine production rate for a given age and gender |
getLifecourseVentilationRate | Get the ventilation rate for a given age and gender |
getMetabData | Gets the metabolism data. Should not be used by directly by... |
getNextID | Get the next Id for the table entry |
getObservationSetChoices | Get all observation sets |
getParameterSet | Get the values for parameters in a given set |
getProjectChemicalList | get the list of chemicals currently in the project database |
getVariabilitySetChoices | Get all variability sets |
HT_IVIVE | server function of high throughput dosimetry |
HT_IVIVEUI | Module for editing high throughput reverse dosimetry... |
httkCalcOralEqDose | Function that runs the httk oral equivalent dose gadget. |
httkParameterPBTK | Call httk function for parameterizing PBPK models |
importAllExposureData | Server function for all (Batch Exposure, TRA, SEEM, and... |
importAllExposureDataUI | UI for importing all (Batch Exposure, TRA, SEEM, and SHEDS)... |
importBatchExposure | Server function for batch data module |
importBatchExposureUI | UI function for importing generic exposure data |
importHTTKData | Server function for importing HTTK data |
importHTTKDataUI | UI for importing data from HTTK |
importParameterSet | Server for import parameter module |
importParameterSetUI | UI for importing parameter sets |
importSEEMData | Server function for seem data module |
importSEEMDataUI | UI for importing SEEM data. |
importShedsData | Server function for importing SHEDS data |
importShedsDataUI | UI function for importing SHEDS data |
interactiveHT | Launch HT-IVIVE interface |
interactivePBPK | Launch the interactive PBPK workflow for the given model |
interactiveReverseDosimetry | Launch Reverse Dosimetry Interface |
loadProject | Load the project from the project file located at the given... |
loadTRA | run TRA gadget and save files as needed. |
mainDbSelect | Runs all select queries to the main database. |
mainDbUpdate | Runs all update queries to the main database. |
newEditVariability | Server function for defining variability and uncertainty... |
newEditVariabilityUI | UI function for defining variability and uncertainty datasets |
newProject | Start a new PLETHEM project. |
newProjectGadget | Command line function launching the new project gadget |
parseConsExpoFile | Parse uploaded file for consexpo |
parseTRAFile | Parse uploaded file for Consumer TRA |
performIVIVE | server side function for performing IVIVE for a chemical |
performIVIVEUI | Shiny module that is called when perform IVIVE button is... |
performPlethemNCA | Functions for performing NCA and returning the data |
plethem-package | Population Life Course Exposure to Health Effects Modeling |
preprocessUIData | preprocess value list from UI |
projectDbSelect | Runs all select queries to the project database. |
projectDbUpdate | Runs all update queries to the project database. |
projectReadTable | Read all the contents of a table |
projectWriteTable | Write the dataframe to the table |
qsarModelone | Calculate Partition Coefficient using the default QSAR model |
qsarModeltwo | Calculate Partition Coefficient using the default QSAR model |
readBatchChemicalFile | Read and parse the chemical batch file |
readOperaPredictions | Read and parse the predictions from OPERA |
reshapePlotData | reshape plotted data to create wide form |
runFDPBPK | Run the PBPK models in forward dosimetry mode |
runHTIVIVE | Run HT-IVIVE |
runPlthemHTIVIVE | High Throughput reverse dosimetry calculation using UI |
runReverseDosimetry | Estimate exposure from montecarlo results and biomonitoring... |
saveAsParameterSet | server side function for saving a new physiological, chemical... |
saveAsParameterSetUI | UI for saving a new physiological, chemical or exposure set... |
saveProject | Save the current project to a location |
saveRestoreParameterSet | Server for the restore/save dialog |
saveRestoreParameterSetUI | UI for the restore/save dialog |
scale_cellular_enzymatic | Scale clearance by age when both cellular and enzymatic... |
scale_enzymatic | Scale clearance by age for when enzymatic clearance is known... |
setUserDb | Sets the path to the existing Db |
updateUIInputs | Update Inputs for PLETHEM UI |
userDbSelect | Runs all select queries to the user database. |
userDbUpdate | Runs all update queries to the user database. |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.