Files in SebastianSosa/ANTs

Animal Network Toolkit Software

R/RcppExports.R R/ant.R R/assoc.gfi.R R/assoc.indices.R R/check.df.R R/check.id.R R/check.matrix.R R/convert.socprog.R R/df.col.findId.R R/df.create.R R/df.create.single.R R/df.ctrlFactor.R R/df.to.gbi.R R/df.to.gbi.focal.R R/df.to.mat.R R/edgl.to.grp.R R/error_matrix.R R/gbi.to.df.R R/grp.to.edgl.R R/import.df.R R/import.mat.R R/mat.binaryzation.R R/mat.lp.R R/mat.symetrize.R R/mat.to.edgl.R R/mat.vectorization.R R/merge.met.R R/met.GE.single.R R/met.R R/met.affinity.R R/met.affinity.single.R R/met.all.single.mat.R R/met.alterDegree.R R/met.assortativity.R R/met.assortativityCat.R R/met.assortatvityContinuous.r R/met.betweenness.R R/met.betweenness.single.R R/met.ci.R R/met.ci.single.R R/met.coutTriangles.R R/met.degree.R R/met.degree.single.R R/met.density.R R/met.dge.single.R R/met.diameter.R R/met.disparity.R R/met.disparity.single.R R/met.eigen.R R/met.eigen.single.R R/met.ge.R R/met.geodesic.R R/met.geodesicDiameter.single.R R/met.indegree.R R/met.indegree.single.R R/met.instrength.R R/met.instrength.single.R R/met.lp.R R/met.lp.single.R R/met.lpEnergyDegree.R R/met.lpEnergyEigen.R R/met.lpcB.R R/met.lpcW.R R/met.lpcentEvcent.R R/met.outdegree.R R/met.outdegree.single.R R/met.outstrength.R R/met.outstrength.single.R R/met.reach.R R/met.reach.single.R R/met.ri.R R/met.ri.single.R R/met.strength.R R/met.strength.single.R R/nodeskMetrics.R R/nodeskMetrics2.R R/onLoad.R R/perm.dataStream.focal.R R/perm.dataStream.group.R R/perm.degree.single.R R/perm.ds.focal.R R/perm.ds.grp.R R/perm.edgl.R R/perm.net.degree.R R/perm.net.links.R R/perm.net.links.single.R R/perm.net.lk.w.R R/perm.net.nl.R R/perm.net.nl.str.R R/perm.net.weigths.R R/perm.nodeLabel.R R/perm.p.R R/perm.redo.R R/post.dist.R R/redo.ds.focal.cum.R R/redo.ds.focal.glm.R R/redo.ds.focal.lm.R R/redo.ds.grp.glm.R R/redo.ds.grp.lm.R R/redo.perm.ds.focal.R R/redo.perm.ds.focal.cum.scd.R R/redo.perm.ds.grp.R R/sampling.effort.R R/sampling.robustness.R R/sampling.uncertainty.R R/sim.df.R R/sim.focal.directed.R R/sim.focal.undirected.R R/sim.gbi.R R/sim.gbi.att.R R/sim.grp.R R/sim.m.R R/sim.socprog.R R/stat.ci.R R/stat.cor.R R/stat.deletions.R R/stat.deletionsPlot.R R/stat.glm.R R/stat.glmm.R R/stat.lm.R R/stat.model.diag.R R/stat.p.R R/stat.t.R R/stat.tauKr.R R/stat.tauKrPartial.R R/stat.tauKrPartialPermSig.R R/stat.tauKrPermSig.R R/stat.tauKrSimple.R R/tauSD.R R/time.heterogeneity.R R/vis.hist.R R/vis.net.R R/which.metric.R R/which.protocol.R README.md inst/tests/tests.R man/ant.Rd man/assoc.gfi.Rd man/assoc.indices.Rd man/assoc_mat.Rd man/assoc_mat_full.Rd man/assoc_mat_one_id.Rd man/check.df.Rd man/check.id.Rd man/check.mat.Rd man/convert.socprog.Rd man/df.col.findId.Rd man/df.create.Rd man/df.create.single.Rd man/df.ctrlFactor.Rd man/df.to.gbi.Rd man/df.to.gbi.focal.Rd man/df.to.mat.Rd man/df_merge.Rd man/df_to_gbi.Rd man/edgl.to.grp.Rd man/edgl_to_matrix.Rd man/error_matrix.Rd man/gbi.to.df.Rd man/gbi_createEmpty.Rd man/grp.to.edgl.Rd man/import.df.Rd man/import.mat.Rd man/laplacian_energy_degrees.Rd man/ldf_merge.Rd man/listDf_merge_single_column.Rd man/list_lapply.Rd man/list_to_df.Rd man/mat.binaryzation.Rd man/mat.lp.Rd man/mat.symetrize.Rd man/mat.to.edgl.Rd man/mat.vectorization.Rd man/mat_binaryzation.Rd man/mat_col_sumsBinary.Rd man/mat_cols_sums.Rd man/mat_dim.Rd man/mat_filter.Rd man/mat_find0.Rd man/mat_isSquare.Rd man/mat_row_extract.Rd man/mat_rows_sums.Rd man/mat_rows_sumsBinary.Rd man/merge.met.Rd man/met.Rd man/met.affinity.Rd man/met.affinity.single.Rd man/met.all.Rd man/met.alterDegree.Rd man/met.assortativity.Rd man/met.assortativityCat.Rd man/met.assortatvityContinuous.Rd man/met.betweenness.Rd man/met.betweenness.single.Rd man/met.ci.Rd man/met.ci.single.Rd man/met.coutTriangles.Rd man/met.degree.Rd man/met.degree.single.Rd man/met.density.Rd man/met.dge.single.Rd man/met.diameter.Rd man/met.disparity.Rd man/met.disparity.single.Rd man/met.eigen.Rd man/met.eigen.single.Rd man/met.ge.Rd man/met.ge.single.Rd man/met.geodesic.Rd man/met.geodesicDiameter.single.Rd man/met.indegree.Rd man/met.indegree.single.Rd man/met.instrength.Rd man/met.instrength.single.Rd man/met.lp.Rd man/met.lp.single.Rd man/met.lpEnergyEigen.Rd man/met.lpcB.Rd man/met.lpcW.Rd man/met.lpcentEvcent.Rd man/met.outdegree.Rd man/met.outdegree.single.Rd man/met.outstrength.Rd man/met.outstrength.single.Rd man/met.reach.Rd man/met.reach.single.Rd man/met.ri.Rd man/met.ri.single.Rd man/met.strength.Rd man/met.strength.single.Rd man/met_strength.Rd man/nodeskMetrics.Rd man/nodeskMetrics2.Rd man/perm.dataStream.focal.Rd man/perm.dataStream.group.Rd man/perm.ds.focal.Rd man/perm.ds.grp.Rd man/perm.edgl.Rd man/perm.met.degree.single.Rd man/perm.net.degree.Rd man/perm.net.links.single.Rd man/perm.net.lk.Rd man/perm.net.lk.w.Rd man/perm.net.nl.Rd man/perm.net.nl.str.Rd man/perm.net.nl.str.single.Rd man/perm.net.weigths.Rd man/perm.nodeLabel.Rd man/perm.redo.Rd man/perm_dataStream1.Rd man/perm_dataStream1_focal.Rd man/perm_dataStream_ControlFactor.Rd man/perm_matVec.Rd man/perm_net_weigths.Rd man/perm_nl_rf.Rd man/perm_nodeLabels.Rd man/perm_vec_factor.Rd man/perm_vec_int.Rd man/post.dist.Rd man/redo.ds.focal.cum.Rd man/redo.ds.focal.glm.Rd man/redo.ds.focal.glmm.Rd man/redo.ds.focal.lm.Rd man/redo.ds.grp.Rd man/redo.perm.ds.grp.cum.Rd man/redo.perm.ds.grp.cum.scd.Rd man/redo.perm.net.nl.str.Rd man/redo_perm_dataStream1_focal.Rd man/redo_perm_dataStream_1.Rd man/redo_perm_dataStream_ControlFactor.Rd man/redo_perm_dataStream_ControlFactor_scd.Rd man/redo_perm_dataStream_focal.Rd man/sampling.effort.Rd man/sampling.robustness.Rd man/sampling.uncertainty.Rd man/sim.df.Rd man/sim.focal.directed.Rd man/sim.focal.undirected.Rd man/sim.gbi.Rd man/sim.gbi.att.Rd man/sim.grp.Rd man/sim.m.Rd man/sim.socprog.Rd man/stat.ci.Rd man/stat.cor.Rd man/stat.deletions.Rd man/stat.deletionsPlot.Rd man/stat.glm.Rd man/stat.glmm.Rd man/stat.lm.Rd man/stat.model.diag.Rd man/stat.p.Rd man/stat.t.Rd man/stat.tauKr.Rd man/stat.tauKrPartial.Rd man/stat.tauKrPartialPermSig.Rd man/stat.tauKrPermSig.Rd man/stat.tauKrSimple.Rd man/tauSD.Rd man/time.heterogeneity.Rd man/tobs_to_mat.Rd man/vec_char_as_factor.Rd man/vec_char_extract_IdValue.Rd man/vec_fill.Rd man/vec_intersect.Rd man/vec_levels.Rd man/vec_lowertri_to_mat.Rd man/vec_num_extract_IdValue.Rd man/vec_sample.Rd man/vec_sum.Rd man/vec_to_mat.Rd man/vec_to_mat_add_diag.Rd man/vec_unique.Rd man/vec_vec_multiply.Rd man/vec_vec_sum.Rd man/vis.hist.Rd man/vis.net.Rd man/which.metric.Rd man/which.protocol.Rd man/which_equal.Rd vignettes/Analytical_protocols.R vignettes/Analytical_protocols.Rmd vignettes/Analytical_protocols.md