Files in SebastianSosa/ant
Animal Network Toolkit Software
.Rbuildignore
.gitignore
.travis.yml
ANTs.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/RcppExports.R
R/ant.R
R/assoc.gfi.R
R/assoc.indices.R
R/check.df.R
R/check.id.R
R/check.matrix.R
R/convert.socprog.R
R/df.col.findId.R
R/df.create.R
R/df.create.single.R
R/df.ctrlFactor.R
R/df.to.gbi.R
R/df.to.gbi.focal.R
R/df.to.mat.R
R/edgl.to.grp.R
R/error_matrix.R
R/gbi.to.df.R
R/grp.to.edgl.R
R/import.df.R
R/import.mat.R
R/mat.binaryzation.R
R/mat.lp.R
R/mat.symetrize.R
R/mat.to.edgl.R
R/mat.vectorization.R
R/merge.met.R
R/met.GE.single.R
R/met.R
R/met.affinity.R
R/met.affinity.single.R
R/met.all.single.mat.R
R/met.alterDegree.R
R/met.assortativity.R
R/met.assortativityCat.R
R/met.assortatvityContinuous.r
R/met.betweenness.R
R/met.betweenness.single.R
R/met.ci.R
R/met.ci.single.R
R/met.coutTriangles.R
R/met.degree.R
R/met.degree.single.R
R/met.density.R
R/met.dge.single.R
R/met.diameter.R
R/met.disparity.R
R/met.disparity.single.R
R/met.eigen.R
R/met.eigen.single.R
R/met.ge.R
R/met.geodesic.R
R/met.geodesicDiameter.single.R
R/met.indegree.R
R/met.indegree.single.R
R/met.instrength.R
R/met.instrength.single.R
R/met.lp.R
R/met.lp.single.R
R/met.lpEnergyDegree.R
R/met.lpEnergyEigen.R
R/met.lpcB.R
R/met.lpcW.R
R/met.lpcentEvcent.R
R/met.outdegree.R
R/met.outdegree.single.R
R/met.outstrength.R
R/met.outstrength.single.R
R/met.reach.R
R/met.reach.single.R
R/met.ri.R
R/met.ri.single.R
R/met.strength.R
R/met.strength.single.R
R/nodeskMetrics.R
R/nodeskMetrics2.R
R/onLoad.R
R/perm.dataStream.focal.R
R/perm.dataStream.group.R
R/perm.degree.single.R
R/perm.ds.focal.R
R/perm.ds.grp.R
R/perm.edgl.R
R/perm.net.degree.R
R/perm.net.links.R
R/perm.net.links.single.R
R/perm.net.lk.w.R
R/perm.net.nl.R
R/perm.net.nl.str.R
R/perm.net.weigths.R
R/perm.nodeLabel.R
R/perm.p.R
R/perm.redo.R
R/post.dist.R
R/redo.ds.focal.cum.R
R/redo.ds.focal.glm.R
R/redo.ds.focal.lm.R
R/redo.ds.grp.glm.R
R/redo.ds.grp.lm.R
R/redo.perm.ds.focal.R
R/redo.perm.ds.focal.cum.scd.R
R/redo.perm.ds.grp.R
R/sampling.effort.R
R/sampling.robustness.R
R/sampling.uncertainty.R
R/sim.df.R
R/sim.focal.directed.R
R/sim.focal.undirected.R
R/sim.gbi.R
R/sim.gbi.att.R
R/sim.grp.R
R/sim.m.R
R/sim.socprog.R
R/stat.ci.R
R/stat.cor.R
R/stat.deletions.R
R/stat.deletionsPlot.R
R/stat.glm.R
R/stat.glmm.R
R/stat.lm.R
R/stat.model.diag.R
R/stat.p.R
R/stat.t.R
R/stat.tauKr.R
R/stat.tauKrPartial.R
R/stat.tauKrPartialPermSig.R
R/stat.tauKrPermSig.R
R/stat.tauKrSimple.R
R/tauSD.R
R/time.heterogeneity.R
R/vis.hist.R
R/vis.net.R
R/which.metric.R
R/which.protocol.R
README.md
data/sim.df.RData
data/sim.focal.directed.RData
data/sim.focal.undirected.RData
data/sim.gbi.RData
data/sim.gbi.att.RData
data/sim.grp.RData
data/sim.m.RData
data/sim.socprog.RData
desktop.ini
inst/CITATION
inst/ressources/ANT.png
inst/ressources/d3-tip.js
inst/ressources/d3.min.js
inst/ressources/no.wav
inst/ressources/ok.wav
inst/tests/tests.R
inst/www/ANTs which metric.html
inst/www/ANTs which protocol.html
inst/www/d3-tip.js
inst/www/d3.min.js
man/ant.Rd
man/assoc.gfi.Rd
man/assoc.indices.Rd
man/assoc_mat.Rd
man/assoc_mat_full.Rd
man/assoc_mat_one_id.Rd
man/check.df.Rd
man/check.id.Rd
man/check.mat.Rd
man/convert.socprog.Rd
man/df.col.findId.Rd
man/df.create.Rd
man/df.create.single.Rd
man/df.ctrlFactor.Rd
man/df.to.gbi.Rd
man/df.to.gbi.focal.Rd
man/df.to.mat.Rd
man/df_merge.Rd
man/df_to_gbi.Rd
man/edgl.to.grp.Rd
man/edgl_to_matrix.Rd
man/error_matrix.Rd
man/gbi.to.df.Rd
man/gbi_createEmpty.Rd
man/grp.to.edgl.Rd
man/import.df.Rd
man/import.mat.Rd
man/laplacian_energy_degrees.Rd
man/ldf_merge.Rd
man/listDf_merge_single_column.Rd
man/list_lapply.Rd
man/list_to_df.Rd
man/mat.binaryzation.Rd
man/mat.lp.Rd
man/mat.symetrize.Rd
man/mat.to.edgl.Rd
man/mat.vectorization.Rd
man/mat_binaryzation.Rd
man/mat_col_sumsBinary.Rd
man/mat_cols_sums.Rd
man/mat_dim.Rd
man/mat_filter.Rd
man/mat_find0.Rd
man/mat_isSquare.Rd
man/mat_row_extract.Rd
man/mat_rows_sums.Rd
man/mat_rows_sumsBinary.Rd
man/merge.met.Rd
man/met.Rd
man/met.affinity.Rd
man/met.affinity.single.Rd
man/met.all.Rd
man/met.alterDegree.Rd
man/met.assortativity.Rd
man/met.assortativityCat.Rd
man/met.assortatvityContinuous.Rd
man/met.betweenness.Rd
man/met.betweenness.single.Rd
man/met.ci.Rd
man/met.ci.single.Rd
man/met.coutTriangles.Rd
man/met.degree.Rd
man/met.degree.single.Rd
man/met.density.Rd
man/met.dge.single.Rd
man/met.diameter.Rd
man/met.disparity.Rd
man/met.disparity.single.Rd
man/met.eigen.Rd
man/met.eigen.single.Rd
man/met.ge.Rd
man/met.ge.single.Rd
man/met.geodesic.Rd
man/met.geodesicDiameter.single.Rd
man/met.indegree.Rd
man/met.indegree.single.Rd
man/met.instrength.Rd
man/met.instrength.single.Rd
man/met.lp.Rd
man/met.lp.single.Rd
man/met.lpEnergyEigen.Rd
man/met.lpcB.Rd
man/met.lpcW.Rd
man/met.lpcentEvcent.Rd
man/met.outdegree.Rd
man/met.outdegree.single.Rd
man/met.outstrength.Rd
man/met.outstrength.single.Rd
man/met.reach.Rd
man/met.reach.single.Rd
man/met.ri.Rd
man/met.ri.single.Rd
man/met.strength.Rd
man/met.strength.single.Rd
man/met_strength.Rd
man/nodeskMetrics.Rd
man/nodeskMetrics2.Rd
man/perm.dataStream.focal.Rd
man/perm.dataStream.group.Rd
man/perm.ds.focal.Rd
man/perm.ds.grp.Rd
man/perm.edgl.Rd
man/perm.met.degree.single.Rd
man/perm.net.degree.Rd
man/perm.net.links.single.Rd
man/perm.net.lk.Rd
man/perm.net.lk.w.Rd
man/perm.net.nl.Rd
man/perm.net.nl.str.Rd
man/perm.net.nl.str.single.Rd
man/perm.net.weigths.Rd
man/perm.nodeLabel.Rd
man/perm.redo.Rd
man/perm_dataStream1.Rd
man/perm_dataStream1_focal.Rd
man/perm_dataStream_ControlFactor.Rd
man/perm_matVec.Rd
man/perm_net_weigths.Rd
man/perm_nl_rf.Rd
man/perm_nodeLabels.Rd
man/perm_vec_factor.Rd
man/perm_vec_int.Rd
man/post.dist.Rd
man/redo.ds.focal.cum.Rd
man/redo.ds.focal.glm.Rd
man/redo.ds.focal.glmm.Rd
man/redo.ds.focal.lm.Rd
man/redo.ds.grp.Rd
man/redo.perm.ds.grp.cum.Rd
man/redo.perm.ds.grp.cum.scd.Rd
man/redo.perm.net.nl.str.Rd
man/redo_perm_dataStream1_focal.Rd
man/redo_perm_dataStream_1.Rd
man/redo_perm_dataStream_ControlFactor.Rd
man/redo_perm_dataStream_ControlFactor_scd.Rd
man/redo_perm_dataStream_focal.Rd
man/sampling.effort.Rd
man/sampling.robustness.Rd
man/sampling.uncertainty.Rd
man/sim.df.Rd
man/sim.focal.directed.Rd
man/sim.focal.undirected.Rd
man/sim.gbi.Rd
man/sim.gbi.att.Rd
man/sim.grp.Rd
man/sim.m.Rd
man/sim.socprog.Rd
man/stat.ci.Rd
man/stat.cor.Rd
man/stat.deletions.Rd
man/stat.deletionsPlot.Rd
man/stat.glm.Rd
man/stat.glmm.Rd
man/stat.lm.Rd
man/stat.model.diag.Rd
man/stat.p.Rd
man/stat.t.Rd
man/stat.tauKr.Rd
man/stat.tauKrPartial.Rd
man/stat.tauKrPartialPermSig.Rd
man/stat.tauKrPermSig.Rd
man/stat.tauKrSimple.Rd
man/tauSD.Rd
man/time.heterogeneity.Rd
man/tobs_to_mat.Rd
man/vec_char_as_factor.Rd
man/vec_char_extract_IdValue.Rd
man/vec_fill.Rd
man/vec_intersect.Rd
man/vec_levels.Rd
man/vec_lowertri_to_mat.Rd
man/vec_num_extract_IdValue.Rd
man/vec_sample.Rd
man/vec_sum.Rd
man/vec_to_mat.Rd
man/vec_to_mat_add_diag.Rd
man/vec_unique.Rd
man/vec_vec_multiply.Rd
man/vec_vec_sum.Rd
man/vis.hist.Rd
man/vis.net.Rd
man/which.metric.Rd
man/which.protocol.Rd
man/which_equal.Rd
src/GraphTools.cpp
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/assoc_mat.cpp
src/assoc_mat_full.cpp
src/assoc_mat_one_id.cpp
src/df_merge.cpp
src/df_to_gbi.cpp
src/edgl_to_matrix.cpp
src/euclidean.cpp
src/gbi_createEmpty.cpp
src/init.c
src/laplacian_energy_degrees.cpp
src/ldf_merge.cpp
src/listDf_merge_single_column.cpp
src/list_lapply.cpp
src/list_to_df.cpp
src/mat_binaryzation.cpp
src/mat_col_extract.cpp
src/mat_col_sumsBinary.cpp
src/mat_cols_sums.cpp
src/mat_dim.cpp
src/mat_erase_col.cpp
src/mat_fill_upper.cpp
src/mat_filter.cpp
src/mat_find0.cpp
src/mat_isSquare.cpp
src/mat_lowertri_to_vec.cpp
src/mat_row_extract.cpp
src/mat_row_sums.cpp
src/mat_row_sumsBinary.cpp
src/mat_row_wise_multiplication.cpp
src/mat_sym_by_lowertri.cpp
src/mat_symetrization.cpp
src/mat_to_vector.cpp
src/met_assor_cat.cpp
src/met_degree.cpp
src/met_density.cpp
src/met_eigen.cpp
src/met_nalters.cpp
src/met_strength.cpp
src/met_sum_egos_strength.cpp
src/na_omit.cpp
src/perm_dataStream1.cpp
src/perm_dataStream1_focal.cpp
src/perm_dataStream_ControlFactor.cpp
src/perm_matVec.cpp
src/perm_mat_col_row.cpp
src/perm_net_weigths.cpp
src/perm_nl_rf.cpp
src/perm_nodeLabels.cpp
src/perm_vec_factor.cpp
src/perm_vec_int.cpp
src/redo_perm_dataStream1_focal.cpp
src/redo_perm_dataStream_1.cpp
src/redo_perm_dataStream_ControlFactor.cpp
src/redo_perm_dataStream_ControlFactor_scd.cpp
src/redo_perm_dataStream_focal.cpp
src/test.cpp
src/tobs_to_mat.cpp
src/vec_char_as_factor.cpp
src/vec_char_extract_IdValue.cpp
src/vec_extract_idValue.cpp
src/vec_fill.cpp
src/vec_id_Equal0.cpp
src/vec_id_sup0.cpp
src/vec_intersect.cpp
src/vec_levels.cpp
src/vec_lowertri_to_mat.cpp
src/vec_match.cpp
src/vec_merge.cpp
src/vec_num_extract_IdValue.cpp
src/vec_resize.cpp
src/vec_sample.cpp
src/vec_sample_all.cpp
src/vec_sum.cpp
src/vec_to_mat.cpp
src/vec_to_mat_add_diag.cpp
src/vec_unique.cpp
src/vec_unmatch.cpp
src/vec_unmatch_indexcc.cpp
src/vec_vec_multiply.cpp
src/vec_vec_sum.cpp
src/vector_abs.cpp
src/which_equal.cpp
vignettes/Analytical.protocols.png
vignettes/Analytical_protocols.R
vignettes/Analytical_protocols.Rmd
vignettes/Analytical_protocols.md
