filter_sumexp: filter_sumexp

In ShinyFabio/ADViSELipidomics: Shinyapp for the acquisition and the analysis of lipidomics data

filter_sumexp

Description

filter_sumexp is the function for the filtering of the SummarizedExperiment object.

Usage

filter_sumexp(data, filt_targ = NULL, value_targ = NULL, filt_class = NULL)

Arguments

data	A list containing both the SumExp objects and other information like replicates and data_type.
filt_targ	Character. A column from the colData where to apply the filter (e.g. "Product").
value_targ	Character. The values to be filtered on the colData (e.g. c("CTRL", "BC")).
filt_class	Character. The lipid classes to be filtered (e.g. c("Cer", "PC", "PE")).

Note

Last change 23/06/2022

ShinyFabio/ADViSELipidomics documentation built on March 21, 2023, 7:30 a.m.