Man pages for Siggers-Lab/hTF_array
Process and Visualize CoRec Data
| accessors | Access or replace data from CoRecMotifs |
| annotate_fluorescence_table | Annotate fluorescence data |
| check_replicates | Check reproducibility of a list of CoRecMotifs |
| compare_conditions | Compare CoRecMotifs across different PBM conditions |
| CoRecMotif | Create a CoRecMotif object |
| CoRecMotif-class | CoRecMotif class |
| example_corecmotifs | Example CoRecMotifs |
| example_fluorescence_tables | Example fluorescence and z-score data |
| filter_corecmotifs | Filter CoRecMotifs |
| find_match | Match a list of CoRecMotifs to reference motifs |
| fluorescence_to_zscore_table | Transform fluorescence values into z-scores |
| hTF_v1_annotation | hTF Array annotation (v1) |
| load_fluorescence_data | Import fluorescence data |
| make_corecmotifs | Make a list of CoRecMotifs |
| make_zscore_motif | Create a z-score motif |
| motif_clusters | Motif cluster assignments |
| pipe | Pipe operator |
| plot_corecmotif | Plot CoRecMotifs and their matching reference motifs |
| process_corecmotifs | Filter a list of CoRecMotifs and match them to reference... |
| summarize_corecmotifs | Make a data frame summarizing a list of CoRecMotifs |
| update_cluster_match | Update the match cluster of a CoRecMotif |
| update_corecmotif | Update a CoRecMotif |
| zscore_table_to_corecmotifs | Create CoRecMotifs from a table of z-score data |
