CoRecMotif: Create a CoRecMotif object

In Siggers-Lab/hTF_array: Process and Visualize CoRec Data

Create a CoRecMotif object

Description

Create a CoRecMotif from a 4 x n matrix of z-scores.

Usage

CoRecMotif(
  probe_set,
  pbm_condition,
  zscore_motif,
  array_id = NULL,
  seed_sequence = NULL
)

Arguments

probe_set	character(1). The probe set name.
pbm_condition	character(1). The PBM condition (e.g., cell type, treatment, and factor profiled).
zscore_motif	matrix(numeric()). The z-score motif. See make_zscore_motif() for a description of the expected format.
array_id	character(1) or NULL. The name of the array/experiment the z-scores are from. If NULL, a random ID will be generated. (Default: NULL)
seed_sequence	character(1) or NULL. The sequence of the seed probe. (Default: NULL)

Value

An object of class CoRecMotif.

Examples

print("FILL THIS IN")

Siggers-Lab/hTF_array documentation built on Feb. 7, 2024, 11:25 p.m.