Man pages for Simon-Coetzee/funcivar
Calculate overlaps and enrichment between genomic variants and genomic features or segmentations
| CalcLD | Calculate LD |
| CalculateEnrichment | Calculate Enrichment |
| GetBioFeatures | Import Biofeatures |
| GetSegmentations | Imports a set of genome segmentation files, particularly... |
| GetVariantsInWindow | Get all variants in a specified genomic window |
| PlotEnrichment | Plot Enrichment |
| SetOverlaps | Assign variants to features |
| SetPopulation | Set Population in VCF |
| ShowOverlaps | Show the overlaps between variants and features |
| SplitVcfLd | Split VCF by Linkage Disequilibrium |
