plotMAofArrays: This function creates a ggplot object where MA plots of all...

Description Usage Arguments

Description

This function creates a ggplot object where MA plots of all Arrays are plotted, present in the MA object

Usage

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plotMAofArrays(MA, subset = NULL, colorVar = "probe.type", ncol = 2,
  smooth = FALSE)

Arguments

MA

object of type MA

subset

Integer vector of the column indices defining the subset

colorVar

the factor for coloring the dots in the plot (could also be NULL) (this vector needs to be present in the data.frame MA$genes)

ncol

Number of columns that is used for facetting the plot

smooth

Adds a LOESS curve to the plot


SimonSchafferer/custom-neuro-ncRNA-microarray documentation built on May 9, 2019, 1:45 p.m.