Description Usage Arguments Value
Reads and processes the gpr files of two channel arrays. Attention changes commas to dots of the names in the first chip
1 2 3 | readAndProcessChipData(currDir, specificationFile = "samplesInfo.txt",
source = "genepix", na.strings = "<NO DATA>", columns, otherColumns,
GALFile, ...)
|
currDir |
directory were the file is read in |
specificationFile |
Text file in the directory of the gpr files were the gpr file is specified |
source |
Source of the Laser Scanner |
na.strings |
The Name of the spots without informatio or data (as defined by the scanning software) |
columns |
custom column Names |
otherColumns |
Additional columns |
GALFile |
the GAL file of the chip |
List containing an annotated data frame a target data.frame and the RG object
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